Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| winged helix dna-binding domain-containing protein | SAMN04244553_3209 | Not Available | Positive | 3280114 - 3281187 | 38985.6 |
| hypothetical protein | SAMN04244553_3210 | Not Available | Positive | 3281562 - 3281756 | 7356.89 |
| dna-binding transcriptional regulator, merr family | SAMN04244553_3211 | Not Available | Positive | 3282250 - 3283503 | 43125.4 |
| hypothetical protein | SAMN04244553_3212 | Not Available | Positive | 3283500 - 3283991 | 18242.3 |
| dna-binding transcriptional regulator, merr family | SAMN04244553_3213 | Not Available | Negative | 3284021 - 3284395 | 14413.3 |
| polyketide cyclase / dehydrase and lipid transport | SAMN04244553_3214 | Not Available | Positive | 3284470 - 3284925 | 16988.6 |
| carotenoid cleavage dioxygenase | SAMN04244553_3215 | Not Available | Positive | 3285096 - 3286439 | 49662.6 |
| cobalt-zinc-cadmium efflux system protein | SAMN04244553_3216 | Not Available | Negative | 3286412 - 3287488 | 38656.3 |
| s-adenosyl methyltransferase | SAMN04244553_3217 | Not Available | Positive | 3287764 - 3288573 | 28823.3 |
| pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing protein | SAMN04244553_3218 | Not Available | Positive | 3288587 - 3289867 | 45487.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

