Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virulence factor mce family protein | SAMN04244553_3188 | Not Available | Positive | 3262565 - 3263521 | 33153.1 |
| hypothetical protein | SAMN04244553_3189 | Not Available | Positive | 3263781 - 3264560 | 26677.5 |
| hypothetical protein | SAMN04244553_3191 | Not Available | Negative | 3265043 - 3265423 | 14633.0 |
| dna-binding transcriptional regulator, marr family | SAMN04244553_3192 | Not Available | Negative | 3265420 - 3265902 | 17542.3 |
| uncharacterized membrane protein yeib | SAMN04244553_3193 | Not Available | Positive | 3265973 - 3267046 | 38969.8 |
| hypothetical protein | SAMN04244553_3194 | Not Available | Negative | 3267056 - 3268231 | 42048.3 |
| hypothetical protein | SAMN04244553_3195 | Not Available | Negative | 3269186 - 3269380 | 6798.82 |
| hypothetical protein | SAMN04244553_3196 | Not Available | Positive | 3269537 - 3269974 | 15054.3 |
| hypothetical protein | SAMN04244553_3197 | Not Available | Positive | 3270011 - 3270166 | 5383.11 |
| uncharacterized conserved protein yjbj, upf0337 family | SAMN04244553_3198 | Not Available | Positive | 3270174 - 3270362 | 7411.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

