Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| non-ribosomal peptide synthase domain tigr01720/amino acid adenylation domain-containing protein | SAMN04244553_3167 | Not Available | Positive | 3232326 - 3246254 | 492396.0 |
| abc-2 type transport system atp-binding protein | SAMN04244553_3168 | Not Available | Positive | 3246251 - 3247222 | 34431.4 |
| abc-2 type transport system permease protein | SAMN04244553_3169 | Not Available | Positive | 3247219 - 3248037 | 28831.9 |
| abc-2 type transport system permease protein | SAMN04244553_3170 | Not Available | Positive | 3248037 - 3248849 | 29010.8 |
| helix-turn-helix domain-containing protein | SAMN04244553_3171 | Not Available | Negative | 3248919 - 3249719 | 29276.4 |
| hypothetical protein | SAMN04244553_3172 | Not Available | Positive | 3249878 - 3250318 | 16170.2 |
| hypothetical protein | SAMN04244553_3173 | Not Available | Negative | 3250325 - 3250549 | 7935.06 |
| protein of unknown function | SAMN04244553_3174 | Not Available | Negative | 3250585 - 3251358 | 28130.2 |
| phosphate transport system protein | SAMN04244553_3175 | Not Available | Negative | 3251816 - 3252574 | 27174.2 |
| Trna-his | Not Available | Not Available | Positive | 3252704 - 3252777 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

