Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator of glucitol operon | SAMN04244553_3157 | Not Available | Negative | 3222715 - 3223122 | 15006.7 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04244553_3158 | Not Available | Negative | 3223233 - 3224108 | 31880.1 |
| transcriptional regulator, tetr family | SAMN04244553_3159 | Not Available | Positive | 3224215 - 3224886 | 24112.0 |
| rna polymerase primary sigma factor | SAMN04244553_3160 | Not Available | Negative | 3224912 - 3225853 | 34427.7 |
| hypothetical protein | SAMN04244553_3161 | Not Available | Negative | 3225972 - 3226241 | 9671.59 |
| transcriptional regulator, tetr family | SAMN04244553_3162 | Not Available | Positive | 3226359 - 3226994 | 23024.3 |
| drug resistance transporter, emrb/qaca subfamily | SAMN04244553_3163 | Not Available | Positive | 3227213 - 3229252 | 71624.1 |
| dna-binding transcriptional regulator, padr family | SAMN04244553_3164 | Not Available | Positive | 3229338 - 3229988 | 24028.1 |
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN04244553_3165 | Not Available | Positive | 3230224 - 3231429 | 42560.2 |
| amp-binding enzyme | SAMN04244553_3166 | Not Available | Positive | 3231617 - 3232075 | 15741.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

