Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/homoserine/homoserine lactone efflux protein | SAMN04244553_3125 | Not Available | Negative | 3194870 - 3195511 | 21715.0 |
| transcriptional regulator, tetr family | SAMN04244553_3126 | Not Available | Negative | 3195560 - 3196159 | 21573.7 |
| glyoxalase-like domain-containing protein | SAMN04244553_3127 | Not Available | Positive | 3196239 - 3196691 | 17293.2 |
| starch phosphorylase | SAMN04244553_3128 | Not Available | Positive | 3196868 - 3199483 | 95943.2 |
| putative mfs transporter, agza family, xanthine/uracil permease | SAMN04244553_3129 | Not Available | Positive | 3199689 - 3201050 | 47481.0 |
| putative oxidoreductase | SAMN04244553_3130 | Not Available | Positive | 3201171 - 3201713 | 18527.8 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN04244553_3131 | Not Available | Positive | 3201835 - 3202230 | 13919.5 |
| formylglycine-generating enzyme, required for sulfatase activity, contains sumf1/fge domain | SAMN04244553_3132 | Not Available | Positive | 3202400 - 3203056 | 24463.2 |
| protein of unknown function | SAMN04244553_3134 | Not Available | Positive | 3204902 - 3205486 | 21029.8 |
| hypothetical protein | SAMN04244553_3135 | Not Available | Positive | 3205546 - 3205938 | 14319.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

