Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN04244553_0409 | Not Available | Negative | 213270 - 213863 | 21522.7 |
| hypothetical protein | SAMN04244553_0410 | Not Available | Positive | 213885 - 214253 | 13686.4 |
| hypothetical protein | SAMN04244553_0411 | Not Available | Positive | 214250 - 214756 | 18823.7 |
| hypothetical protein | SAMN04244553_0412 | Not Available | Negative | 214740 - 215495 | 28655.8 |
| transcriptional regulator, tetr family | SAMN04244553_0413 | Not Available | Positive | 215624 - 216289 | 23720.3 |
| iron complex transport system atp-binding protein | SAMN04244553_0414 | Not Available | Negative | 216294 - 217103 | 29154.0 |
| dna-binding transcriptional regulator, fadr family | SAMN04244553_0415 | Not Available | Negative | 217126 - 217797 | 24307.3 |
| 2-isopropylmalate synthase | SAMN04244553_0416 | Not Available | Positive | 217968 - 219734 | 64807.7 |
| predicted atpase | SAMN04244553_0417 | Not Available | Positive | 219785 - 222085 | 83279.5 |
| protein of unknown function | SAMN04244553_0418 | Not Available | Negative | 222206 - 222727 | 19690.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

