Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine oxidase | SAMN04244553_3092 | Not Available | Negative | 3161378 - 3162475 | 37777.2 |
| thiamine-phosphate diphosphorylase | SAMN04244553_3093 | Not Available | Positive | 3162596 - 3163300 | 25052.0 |
| 8-oxo-dgtp diphosphatase | SAMN04244553_3094 | Not Available | Negative | 3163301 - 3163978 | 23846.1 |
| hypothetical protein | SAMN04244553_3095 | Not Available | Positive | 3164121 - 3165497 | 48141.3 |
| polar amino acid transport system substrate-binding protein | SAMN04244553_3096 | Not Available | Positive | 3165494 - 3166489 | 34978.4 |
| serine/threonine-protein kinase pkng | SAMN04244553_3097 | Not Available | Positive | 3166495 - 3169074 | 92209.0 |
| acetate kinase | SAMN04244553_3098 | Not Available | Negative | 3169097 - 3170296 | 42380.3 |
| phosphotransacetylase | SAMN04244553_3099 | Not Available | Negative | 3170400 - 3172472 | 73725.7 |
| deazaflavin-dependent oxidoreductase, nitroreductase family | SAMN04244553_3100 | Not Available | Positive | 3172572 - 3173078 | 18603.3 |
| predicted ferric reductase | SAMN04244553_3101 | Not Available | Negative | 3173253 - 3174569 | 48251.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

