Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl acp synthase | SAMN04244553_3062 | Not Available | Positive | 3129240 - 3130493 | 43262.4 |
| thioesterase-like superfamily protein | SAMN04244553_3063 | Not Available | Positive | 3130604 - 3131398 | 28745.2 |
| hypothetical protein | SAMN04244553_3064 | Not Available | Negative | 3131400 - 3131873 | 16604.0 |
| transcriptional regulator, tetr family | SAMN04244553_3065 | Not Available | Negative | 3132110 - 3132757 | 23226.9 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_3066 | Not Available | Positive | 3132846 - 3133982 | 41802.8 |
| putative nadh-flavin reductase | SAMN04244553_3067 | Not Available | Positive | 3134152 - 3134775 | 22713.1 |
| gtpase, g3e family | SAMN04244553_3068 | Not Available | Negative | 3136488 - 3137636 | 41507.3 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | SAMN04244553_3069 | Not Available | Positive | 3137793 - 3138635 | 28991.7 |
| transcriptional regulator, tetr family | SAMN04244553_3070 | Not Available | Negative | 3139022 - 3139744 | 27059.0 |
| protein of unknown function | SAMN04244553_3071 | Not Available | Negative | 3139769 - 3140095 | 12184.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

