Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multicomponent na+:h+ antiporter subunit f | SAMN04244553_3042 | Not Available | Positive | 3107413 - 3107673 | 8764.95 |
| multicomponent na+:h+ antiporter subunit g | SAMN04244553_3043 | Not Available | Positive | 3107670 - 3108002 | 11786.6 |
| pap2 superfamily protein | SAMN04244553_3044 | Not Available | Negative | 3108192 - 3109511 | 47667.8 |
| carboxylate-amine ligase | SAMN04244553_3045 | Not Available | Negative | 3109619 - 3110761 | 42239.2 |
| superoxide dismutase, cu-zn family | SAMN04244553_3046 | Not Available | Negative | 3110775 - 3111464 | 23083.7 |
| lytr cell envelope-related transcriptional attenuator | SAMN04244553_3047 | Not Available | Negative | 3111592 - 3112149 | 17872.9 |
| protein of unknown function | SAMN04244553_3048 | Not Available | Negative | 3112208 - 3112564 | 13097.5 |
| peptide deformylase | SAMN04244553_3049 | Not Available | Positive | 3112752 - 3113342 | 21004.8 |
| acetyltransferase (gnat) family protein | SAMN04244553_3050 | Not Available | Positive | 3113332 - 3114303 | 35034.0 |
| exodeoxyribonuclease-3 | SAMN04244553_3051 | Not Available | Positive | 3114331 - 3115161 | 30704.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

