Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional enzyme cysn/cysc | SAMN04244553_0399 | Not Available | Negative | 202168 - 204003 | 66604.2 |
| sulfate adenylyltransferase subunit 2 | SAMN04244553_0400 | Not Available | Negative | 204003 - 204935 | 35376.7 |
| dna-binding transcriptional regulator, iclr family | SAMN04244553_0401 | Not Available | Negative | 204968 - 205888 | 32550.2 |
| hypothetical protein | SAMN04244553_0402 | Not Available | Positive | 205973 - 207136 | 43593.5 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04244553_0403 | Not Available | Positive | 207136 - 207912 | 27616.2 |
| sulfotransferase family protein | SAMN04244553_0404 | Not Available | Positive | 207930 - 209093 | 43919.5 |
| hypothetical protein | SAMN04244553_0405 | Not Available | Positive | 209431 - 209955 | 19463.9 |
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN04244553_0406 | Not Available | Positive | 210225 - 211688 | 54029.6 |
| acyl-coenzyme a thioesterase paai, contains hgg motif | SAMN04244553_0407 | Not Available | Negative | 211696 - 212382 | 24967.5 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN04244553_0408 | Not Available | Positive | 212604 - 213257 | 23560.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

