Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoamide dehydrogenase | SAMN04244553_3002 | Not Available | Negative | 3064805 - 3066205 | 49640.4 |
| arac-type dna-binding protein | SAMN04244553_3003 | Not Available | Positive | 3066349 - 3067398 | 37523.4 |
| hypothetical protein | SAMN04244553_3004 | Not Available | Positive | 3067656 - 3068681 | 35315.0 |
| membrane dipeptidase | SAMN04244553_3005 | Not Available | Negative | 3068944 - 3069918 | 35081.9 |
| hypothetical protein | SAMN04244553_3006 | Not Available | Positive | 3070075 - 3070620 | 19103.8 |
| prolyl oligopeptidase | SAMN04244553_3007 | Not Available | Positive | 3070663 - 3072720 | 76719.6 |
| acyltransferase, ws/dgat/mgat | SAMN04244553_3008 | Not Available | Negative | 3072724 - 3074079 | 48905.1 |
| transcriptional regulator, tetr family | SAMN04244553_3009 | Not Available | Positive | 3074344 - 3074982 | 23375.9 |
| predicted alpha/beta hydrolase | SAMN04244553_3010 | Not Available | Negative | 3075020 - 3075880 | 30968.2 |
| transcriptional regulator, tetr family | SAMN04244553_3011 | Not Available | Negative | 3075942 - 3076574 | 22893.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

