Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_2918 | Not Available | Negative | 2979347 - 2979553 | 7480.81 |
| gntr family transcriptional regulator | SAMN04244553_2919 | Not Available | Negative | 2979657 - 2980403 | 27216.2 |
| hypothetical protein | SAMN04244553_2920 | Not Available | Positive | 2980709 - 2981098 | 13499.0 |
| hypothetical protein | SAMN04244553_2921 | Not Available | Positive | 2981133 - 2981780 | 23079.5 |
| espg family protein | SAMN04244553_2922 | Not Available | Positive | 2981777 - 2982505 | 26758.9 |
| polyphosphate:nucleotide phosphotransferase, ppk2 family | SAMN04244553_2923 | Not Available | Positive | 2982552 - 2983397 | 32412.7 |
| repressor lexa | SAMN04244553_2925 | Not Available | Negative | 2983959 - 2984606 | 23424.0 |
| ribbon-helix-helix protein, copg family | SAMN04244553_2926 | Not Available | Negative | 2984603 - 2984857 | 9187.88 |
| methyltransferase domain-containing protein | SAMN04244553_2927 | Not Available | Positive | 2984905 - 2985684 | 27806.0 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_2929 | Not Available | Negative | 2986367 - 2987185 | 30515.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

