Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyltetrahydrofolate deformylase | SAMN04244553_2908 | Not Available | Positive | 2968044 - 2968931 | 32612.9 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_2909 | Not Available | Negative | 2969242 - 2970285 | 37351.3 |
| protein of unknown function | SAMN04244553_2910 | Not Available | Negative | 2971629 - 2971934 | 10830.8 |
| heparin binding hemagglutinin hbha | SAMN04244553_2911 | Not Available | Negative | 2972089 - 2972745 | 23548.8 |
| transcriptional regulator, contains xre-family hth domain | SAMN04244553_2912 | Not Available | Negative | 2972742 - 2973245 | 18294.2 |
| uncharacterized membrane-anchored protein yjin, duf445 family | SAMN04244553_2913 | Not Available | Negative | 2973351 - 2974673 | 48946.0 |
| transcriptional regulator, tetr family | SAMN04244553_2914 | Not Available | Positive | 2974864 - 2975544 | 25080.8 |
| abc1 family protein | SAMN04244553_2915 | Not Available | Positive | 2975728 - 2977212 | 55145.4 |
| uncharacterized conserved protein | SAMN04244553_2916 | Not Available | Positive | 2977256 - 2978506 | 43625.9 |
| ubiquinone/menaquinone biosynthesis c-methylase ubie | SAMN04244553_2917 | Not Available | Positive | 2978577 - 2979209 | 22872.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

