Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein-anchoring transpeptidase erfk/srfk | SAMN04244553_2897 | Not Available | Negative | 2958245 - 2959438 | 42094.1 |
| udp-n-acetylmuramate dehydrogenase | SAMN04244553_2898 | Not Available | Negative | 2959557 - 2960648 | 37404.6 |
| protein of unknown function | SAMN04244553_2899 | Not Available | Positive | 2960689 - 2961174 | 17357.4 |
| protein of unknown function | SAMN04244553_2900 | Not Available | Positive | 2961214 - 2961735 | 19624.7 |
| hypothetical protein | SAMN04244553_2901 | Not Available | Positive | 2961705 - 2962505 | 29517.7 |
| hypothetical protein | SAMN04244553_2903 | Not Available | Negative | 2962879 - 2964303 | 50683.4 |
| transcriptional regulator, predicted component of viral defense system | SAMN04244553_2904 | Not Available | Negative | 2964464 - 2965111 | 22923.7 |
| protein of unknown function | SAMN04244553_2905 | Not Available | Positive | 2965172 - 2965900 | 25061.2 |
| deoxyribose-phosphate aldolase | SAMN04244553_2906 | Not Available | Negative | 2965951 - 2966619 | 22305.9 |
| putative acetyltransferase | SAMN04244553_2907 | Not Available | Positive | 2966778 - 2967329 | 19283.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

