Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, hxlr family | SAMN04244553_2887 | Not Available | Negative | 2947112 - 2947885 | 27638.1 |
| hypothetical protein | SAMN04244553_2888 | Not Available | Positive | 2947975 - 2948634 | 22119.4 |
| hypothetical protein | SAMN04244553_2889 | Not Available | Negative | 2948946 - 2950997 | 72988.9 |
| phosphoglycerate mutase | SAMN04244553_2890 | Not Available | Negative | 2951759 - 2952496 | 27405.5 |
| glucokinase | SAMN04244553_2891 | Not Available | Negative | 2952540 - 2953433 | 29755.9 |
| putative sensory transduction regulator | SAMN04244553_2892 | Not Available | Negative | 2953567 - 2954070 | 19277.1 |
| d-inositol-3-phosphate glycosyltransferase | SAMN04244553_2893 | Not Available | Negative | 2954067 - 2955455 | 49111.5 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN04244553_2894 | Not Available | Negative | 2955635 - 2956522 | 30661.2 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN04244553_2895 | Not Available | Positive | 2956553 - 2957287 | 25872.7 |
| large conductance mechanosensitive channel | SAMN04244553_2896 | Not Available | Positive | 2957480 - 2957941 | 16240.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

