Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii synthase /uroporphyrinogen-iii c-methyltransferase | SAMN04244553_2866 | Not Available | Negative | 2926780 - 2928342 | 55170.0 |
| hydroxymethylbilane synthase | SAMN04244553_2867 | Not Available | Negative | 2928339 - 2929433 | 37721.7 |
| glutamyl-trna reductase | SAMN04244553_2868 | Not Available | Negative | 2929430 - 2930842 | 49158.9 |
| redox-sensing transcriptional repressor | SAMN04244553_2869 | Not Available | Negative | 2930916 - 2931746 | 28525.3 |
| glutaredoxin-like domain | SAMN04244553_2870 | Not Available | Negative | 2931982 - 2932266 | 9941.64 |
| had-superfamily subfamily ib hydrolase, tigr01490 | SAMN04244553_2871 | Not Available | Positive | 2932379 - 2933401 | 36309.4 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | SAMN04244553_2872 | Not Available | Negative | 2933621 - 2934649 | 38099.3 |
| udp-glucose 4-epimerase | SAMN04244553_2873 | Not Available | Negative | 2934646 - 2935719 | 38724.1 |
| transcriptional regulator, alpa family | SAMN04244553_2875 | Not Available | Negative | 2936282 - 2936470 | 6841.32 |
| pyrroline-5-carboxylate reductase | SAMN04244553_2876 | Not Available | Negative | 2936766 - 2937587 | 27672.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

