Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_2856 | Not Available | Negative | 2921115 - 2921333 | 6825.47 |
| hypothetical protein | SAMN04244553_2857 | Not Available | Negative | 2921428 - 2921625 | 6267.86 |
| hypothetical protein | SAMN04244553_2858 | Not Available | Negative | 2921738 - 2921986 | 8503.55 |
| hypothetical protein | SAMN04244553_2859 | Not Available | Negative | 2921983 - 2922657 | 23891.2 |
| hypothetical protein | SAMN04244553_2860 | Not Available | Negative | 2922710 - 2922829 | 4240.61 |
| hypothetical protein | SAMN04244553_2861 | Not Available | Negative | 2922987 - 2923496 | 17985.3 |
| porphobilinogen synthase | SAMN04244553_2862 | Not Available | Negative | 2923514 - 2924500 | 35412.2 |
| hypothetical protein | SAMN04244553_2863 | Not Available | Positive | 2924628 - 2925428 | 28561.6 |
| protein of unknown function | SAMN04244553_2864 | Not Available | Positive | 2925650 - 2926033 | 13078.4 |
| hypothetical protein | SAMN04244553_2865 | Not Available | Positive | 2926142 - 2926423 | 10571.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

