Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylinositol alpha 1,6-mannosyltransferase | SAMN04244553_2815 | Not Available | Positive | 2878239 - 2879381 | 40599.9 |
| demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase | SAMN04244553_2816 | Not Available | Positive | 2879476 - 2880180 | 25653.0 |
| sulfite reductase, alpha subunit (flavoprotein) | SAMN04244553_2817 | Not Available | Positive | 2880310 - 2884539 | 152777.0 |
| predicted oxidoreductase | SAMN04244553_2818 | Not Available | Negative | 2884609 - 2885670 | 38313.5 |
| transcriptional regulator, tetr family | SAMN04244553_2819 | Not Available | Positive | 2885758 - 2886396 | 21959.8 |
| tigr03086 family protein | SAMN04244553_2820 | Not Available | Negative | 2886528 - 2887115 | 20748.2 |
| hypothetical protein | SAMN04244553_2821 | Not Available | Positive | 2887266 - 2887502 | 8264.92 |
| hypothetical protein | SAMN04244553_2822 | Not Available | Positive | 2887622 - 2887867 | 8916.74 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase | SAMN04244553_2823 | Not Available | Negative | 2887876 - 2889516 | 56777.1 |
| hypothetical protein | SAMN04244553_2824 | Not Available | Negative | 2889874 - 2890320 | 15687.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

