Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_2805 | Not Available | Positive | 2870698 - 2871189 | 18113.6 |
| heat shock protein. metallo peptidase. merops family m48b | SAMN04244553_2806 | Not Available | Negative | 2871197 - 2872075 | 31136.1 |
| heptaprenyl diphosphate synthase | SAMN04244553_2807 | Not Available | Negative | 2872684 - 2873706 | 36371.0 |
| geranylgeranyl reductase family | SAMN04244553_2808 | Not Available | Positive | 2873894 - 2875165 | 45409.1 |
| arac-type dna-binding protein | SAMN04244553_2809 | Not Available | Positive | 2875174 - 2875593 | 15337.5 |
| catechol 2,3-dioxygenase | SAMN04244553_2810 | Not Available | Positive | 2875649 - 2876092 | 16448.5 |
| protein of unknown function | SAMN04244553_2811 | Not Available | Negative | 2876148 - 2876654 | 18394.9 |
| hypothetical protein | SAMN04244553_2812 | Not Available | Positive | 2876689 - 2877162 | 17039.9 |
| cupin domain-containing protein | SAMN04244553_2813 | Not Available | Negative | 2877229 - 2877594 | 12398.8 |
| marr family protein | SAMN04244553_2814 | Not Available | Positive | 2877660 - 2878124 | 17266.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

