Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_0379 | Not Available | Negative | 182303 - 182449 | 5366.62 |
| hypothetical protein | SAMN04244553_0380 | Not Available | Positive | 182737 - 183018 | 9669.85 |
| peroxiredoxin, ohr subfamily | SAMN04244553_0381 | Not Available | Positive | 183160 - 183576 | 13869.4 |
| hypothetical protein | SAMN04244553_0382 | Not Available | Positive | 183698 - 184123 | 15629.4 |
| short-chain dehydrogenase | SAMN04244553_0383 | Not Available | Positive | 184166 - 184963 | 28159.6 |
| amino acid transporter | SAMN04244553_0384 | Not Available | Positive | 184971 - 186293 | 45008.0 |
| 6-phosphogluconate dehydrogenase (decarboxylating) | SAMN04244553_0385 | Not Available | Positive | 186421 - 187866 | 51535.9 |
| nucleoside-diphosphate-sugar epimerase | SAMN04244553_0386 | Not Available | Positive | 187973 - 188893 | 32356.7 |
| hypothetical protein | SAMN04244553_0387 | Not Available | Positive | 188989 - 189288 | 11065.1 |
| predicted kinase, aminoglycoside phosphotransferase (apt) family | SAMN04244553_0388 | Not Available | Positive | 189285 - 190283 | 36663.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

