Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN04244553_2785 | Not Available | Negative | 2855654 - 2856730 | 38584.5 |
| virulence factor mce family protein | SAMN04244553_2786 | Not Available | Negative | 2856727 - 2858073 | 48344.4 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN04244553_2787 | Not Available | Negative | 2858070 - 2858936 | 30472.6 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN04244553_2788 | Not Available | Negative | 2858940 - 2859734 | 27541.2 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | SAMN04244553_2789 | Not Available | Negative | 2859745 - 2860821 | 39258.5 |
| lsu ribosomal protein l12p | SAMN04244553_2790 | Not Available | Negative | 2861067 - 2861447 | 13193.9 |
| lsu ribosomal protein l10p | SAMN04244553_2791 | Not Available | Negative | 2861507 - 2862040 | 18388.2 |
| drug resistance transporter, emrb/qaca subfamily | SAMN04244553_2792 | Not Available | Positive | 2862487 - 2864109 | 56977.3 |
| hypothetical protein | SAMN04244553_2793 | Not Available | Negative | 2864160 - 2864579 | 15382.3 |
| hypothetical protein | SAMN04244553_2794 | Not Available | Negative | 2864570 - 2864776 | 7489.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

