Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_2775 | Not Available | Negative | 2840698 - 2841105 | 15038.1 |
| hypothetical protein | SAMN04244553_2776 | Not Available | Negative | 2841102 - 2841374 | 10150.2 |
| dna-directed rna polymerase subunit beta' | SAMN04244553_2777 | Not Available | Negative | 2841443 - 2845396 | 146710.0 |
| dna-directed rna polymerase subunit beta | SAMN04244553_2778 | Not Available | Negative | 2845506 - 2848979 | 127959.0 |
| mce-associated membrane protein | SAMN04244553_2779 | Not Available | Negative | 2849477 - 2850157 | 24526.2 |
| mce-associated membrane protein | SAMN04244553_2780 | Not Available | Negative | 2850154 - 2850846 | 23623.9 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN04244553_2781 | Not Available | Negative | 2850877 - 2852118 | 44553.0 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN04244553_2782 | Not Available | Negative | 2852115 - 2853374 | 43868.5 |
| virulence factor mce family protein | SAMN04244553_2783 | Not Available | Negative | 2853371 - 2854642 | 45581.3 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | SAMN04244553_2784 | Not Available | Negative | 2854644 - 2855654 | 36279.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

