Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN04244553_2765 | Not Available | Positive | 2832638 - 2833420 | 28787.1 |
| hypothetical protein | SAMN04244553_2766 | Not Available | Positive | 2833417 - 2834406 | 35709.3 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04244553_2767 | Not Available | Negative | 2834563 - 2835042 | 18380.4 |
| dna-binding transcriptional regulator, arsr family | SAMN04244553_2768 | Not Available | Negative | 2835039 - 2835371 | 12726.4 |
| acyl-coenzyme a thioesterase paai, contains hgg motif | SAMN04244553_2769 | Not Available | Positive | 2835526 - 2835996 | 16422.7 |
| hypothetical protein | SAMN04244553_2770 | Not Available | Negative | 2836327 - 2836974 | 22159.7 |
| winged helix dna-binding domain-containing protein | SAMN04244553_2771 | Not Available | Negative | 2837096 - 2837560 | 17393.3 |
| hypothetical protein | SAMN04244553_2772 | Not Available | Positive | 2837646 - 2838017 | 13593.1 |
| hypothetical protein | SAMN04244553_2773 | Not Available | Negative | 2838288 - 2839040 | 26209.5 |
| hypothetical protein | SAMN04244553_2774 | Not Available | Positive | 2839233 - 2840687 | 53322.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

