Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph2:quinone reductase | SAMN04244553_2755 | Not Available | Negative | 2824166 - 2825140 | 33538.7 |
| excreted virulence factor espc, type vii esx diderm | SAMN04244553_2756 | Not Available | Positive | 2825252 - 2825578 | 11293.3 |
| transglycosylase slt domain-containing protein | SAMN04244553_2757 | Not Available | Positive | 2825575 - 2826714 | 39510.8 |
| acyl-acp thioesterase | SAMN04244553_2758 | Not Available | Positive | 2826907 - 2827680 | 29648.2 |
| ferredoxin--nadp+ reductase | SAMN04244553_2759 | Not Available | Negative | 2827768 - 2829438 | 60412.4 |
| phosphohistidine phosphatase | SAMN04244553_2760 | Not Available | Positive | 2829629 - 2830120 | 18039.5 |
| hypothetical protein | SAMN04244553_2761 | Not Available | Negative | 2830147 - 2830350 | 7129.12 |
| catechol 2,3-dioxygenase | SAMN04244553_2762 | Not Available | Positive | 2830437 - 2830805 | 13366.7 |
| dna-binding transcriptional regulator, merr family | SAMN04244553_2763 | Not Available | Positive | 2831082 - 2831534 | 16969.1 |
| predicted oxidoreductase | SAMN04244553_2764 | Not Available | Positive | 2831531 - 2832550 | 36022.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

