Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor g | SAMN04244553_2745 | Not Available | Negative | 2812870 - 2814960 | 75615.2 |
| translation elongation factor 1a (ef-1a/ef-tu) | SAMN04244553_2746 | Not Available | Negative | 2815351 - 2816541 | 43728.4 |
| translation elongation factor 2 (ef-2/ef-g) | SAMN04244553_2747 | Not Available | Negative | 2816669 - 2818771 | 77049.9 |
| ssu ribosomal protein s7p | SAMN04244553_2748 | Not Available | Negative | 2818922 - 2819392 | 17480.2 |
| ssu ribosomal protein s12p | SAMN04244553_2749 | Not Available | Negative | 2819394 - 2819768 | 13809.0 |
| protein of unknown function | SAMN04244553_2750 | Not Available | Negative | 2820042 - 2820596 | 19465.8 |
| protein of unknown function | SAMN04244553_2751 | Not Available | Negative | 2820607 - 2821134 | 18445.8 |
| 4-hydroxyphenylpyruvate dioxygenase | SAMN04244553_2752 | Not Available | Negative | 2821174 - 2822349 | 43684.6 |
| transcriptional regulator, asnc family | SAMN04244553_2753 | Not Available | Positive | 2822511 - 2823035 | 18558.2 |
| winged helix dna-binding domain-containing protein | SAMN04244553_2754 | Not Available | Negative | 2823037 - 2824149 | 40923.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

