Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_2725 | Not Available | Positive | 2751897 - 2753279 | 50379.7 |
| mbth protein | SAMN04244553_2726 | Not Available | Negative | 2753450 - 2753668 | 8064.37 |
| amino acid adenylation domain-containing protein | SAMN04244553_2727 | Not Available | Negative | 2753698 - 2778423 | 880182.0 |
| amp-binding enzyme | SAMN04244553_2728 | Not Available | Negative | 2778713 - 2779582 | 29725.4 |
| amino acid adenylation domain-containing protein | SAMN04244553_2729 | Not Available | Negative | 2779586 - 2797540 | 641301.0 |
| gaf domain-containing protein | SAMN04244553_2730 | Not Available | Negative | 2797968 - 2799338 | 48642.7 |
| dehydrogenase, rv0697 family | SAMN04244553_2731 | Not Available | Negative | 2799464 - 2800936 | 51201.0 |
| mycofactocin system glycosyltransferase | SAMN04244553_2732 | Not Available | Negative | 2801008 - 2802411 | 51218.9 |
| mycofactocin radical sam maturase | SAMN04244553_2733 | Not Available | Negative | 2802642 - 2804228 | 55997.4 |
| transcriptional regulator, tetr family | SAMN04244553_2734 | Not Available | Positive | 2804622 - 2805245 | 23063.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

