Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| virulence factor mce family protein | SAMN04244553_2715 | Not Available | Negative | 2742012 - 2743427 | 48549.6 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN04244553_2716 | Not Available | Negative | 2743437 - 2744300 | 30430.9 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | SAMN04244553_2717 | Not Available | Negative | 2744302 - 2745183 | 30922.3 |
| hypothetical protein | SAMN04244553_2718 | Not Available | Negative | 2745613 - 2745801 | 6704.68 |
| hypothetical protein | SAMN04244553_2719 | Not Available | Negative | 2745801 - 2746025 | 8400.61 |
| uncharacterized conserved protein, duf2236 family | SAMN04244553_2720 | Not Available | Positive | 2746341 - 2747249 | 34905.0 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04244553_2721 | Not Available | Positive | 2747259 - 2747705 | 16793.6 |
| d-alanyl-d-alanine carboxypeptidase | SAMN04244553_2722 | Not Available | Negative | 2747776 - 2748903 | 39218.7 |
| transposase and inactivated derivatives, is30 family | SAMN04244553_2723 | Not Available | Positive | 2749450 - 2750691 | 45742.6 |
| hypothetical protein | SAMN04244553_2724 | Not Available | Negative | 2751453 - 2751641 | 7025.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

