Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator, lysr family | SAMN04244553_2695 | Not Available | Negative | 2719790 - 2720716 | 33341.9 |
| sugar transporter | SAMN04244553_2696 | Not Available | Positive | 2720857 - 2722215 | 48783.6 |
| 3-hydroxybutyrate dehydrogenase | SAMN04244553_2697 | Not Available | Positive | 2722212 - 2722958 | 26319.7 |
| transcriptional regulator, tetr family | SAMN04244553_2698 | Not Available | Negative | 2722979 - 2723581 | 21771.3 |
| 3-methylcrotonyl-coa carboxylase beta subunit | SAMN04244553_2699 | Not Available | Positive | 2723671 - 2725263 | 56801.8 |
| acetyl-coa/propionyl-coa carboxylase, biotin carboxylase, biotin carboxyl carrier protein | SAMN04244553_2700 | Not Available | Positive | 2725269 - 2727308 | 71785.6 |
| butyryl-coa dehydrogenase | SAMN04244553_2701 | Not Available | Positive | 2727305 - 2728465 | 41423.2 |
| acyl dehydratase | SAMN04244553_2702 | Not Available | Positive | 2728462 - 2728944 | 17802.2 |
| citrate lyase subunit beta / citryl-coa lyase | SAMN04244553_2703 | Not Available | Positive | 2728941 - 2729756 | 28659.0 |
| acetoacetyl-coa synthetase | SAMN04244553_2704 | Not Available | Positive | 2729785 - 2731725 | 70156.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

