Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid adenylation domain-containing protein | SAMN04244553_2680 | Not Available | Negative | 2692305 - 2707316 | 539535.0 |
| hypothetical protein | SAMN04244553_2682 | Not Available | Negative | 2708213 - 2708758 | 17931.9 |
| serine/arginine repetitive matrix protein 2 | SAMN04244553_2683 | Not Available | Positive | 2708893 - 2710194 | 50097.1 |
| hypothetical protein | SAMN04244553_2684 | Not Available | Negative | 2710423 - 2712024 | 56360.4 |
| hypothetical protein | SAMN04244553_2686 | Not Available | Positive | 2713102 - 2713641 | 20484.1 |
| sukh-3 immunity protein | SAMN04244553_2688 | Not Available | Positive | 2715453 - 2715944 | 18638.9 |
| ywqj-like deaminase | SAMN04244553_2689 | Not Available | Positive | 2715945 - 2716331 | 13787.4 |
| hypothetical protein | SAMN04244553_2690 | Not Available | Positive | 2716324 - 2717430 | 41508.5 |
| precorrin-4 c11-methyltransferase | SAMN04244553_2692 | Not Available | Negative | 2718069 - 2718845 | 27402.7 |
| ppox class probable f420-dependent enzyme | SAMN04244553_2694 | Not Available | Negative | 2719342 - 2719767 | 15353.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

