Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN04244553_2670 | Not Available | Positive | 2664487 - 2665161 | 24534.4 |
| dna-binding transcriptional regulator, marr family | SAMN04244553_2671 | Not Available | Negative | 2665201 - 2665674 | 17267.7 |
| lysophospholipase l1 | SAMN04244553_2672 | Not Available | Positive | 2665786 - 2666928 | 41233.5 |
| transcriptional regulator, tetr family | SAMN04244553_2673 | Not Available | Negative | 2666950 - 2667564 | 22122.8 |
| peroxiredoxin | SAMN04244553_2674 | Not Available | Positive | 2667635 - 2668192 | 20457.7 |
| protein of unknown function | SAMN04244553_2675 | Not Available | Positive | 2668189 - 2668725 | 19239.6 |
| yhs domain-containing protein | SAMN04244553_2676 | Not Available | Positive | 2668722 - 2669327 | 21952.3 |
| hypothetical protein | SAMN04244553_2677 | Not Available | Positive | 2669573 - 2669782 | 6622.15 |
| hypothetical protein | SAMN04244553_2678 | Not Available | Negative | 2669927 - 2670055 | 4525.45 |
| non-ribosomal peptide synthase domain tigr01720/amino acid adenylation domain-containing protein | SAMN04244553_2679 | Not Available | Negative | 2670190 - 2692302 | 789758.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

