Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate isomerase | SAMN04244553_2640 | Not Available | Positive | 2633216 - 2634853 | 59095.6 |
| ion channel | SAMN04244553_2641 | Not Available | Negative | 2634860 - 2635447 | 21567.2 |
| hypothetical protein | SAMN04244553_2642 | Not Available | Negative | 2635673 - 2636521 | 29753.4 |
| putative acyl-coa dehydrogenase | SAMN04244553_2643 | Not Available | Negative | 2636553 - 2638175 | 58793.0 |
| transcriptional regulator, tetr family | SAMN04244553_2644 | Not Available | Negative | 2638162 - 2638794 | 21711.0 |
| enoyl-coa hydratase | SAMN04244553_2645 | Not Available | Positive | 2638919 - 2639680 | 26451.5 |
| hypothetical protein | SAMN04244553_2646 | Not Available | Positive | 2639683 - 2641119 | 50751.2 |
| hypothetical protein | SAMN04244553_2647 | Not Available | Negative | 2641302 - 2641991 | 24283.8 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN04244553_2648 | Not Available | Positive | 2642072 - 2643484 | 49540.2 |
| protein of unknown function | SAMN04244553_2649 | Not Available | Positive | 2643736 - 2643981 | 9349.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

