Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN04244553_2620 | Not Available | Negative | 2608731 - 2609315 | 20722.6 |
| aaa domain-containing protein | SAMN04244553_2621 | Not Available | Positive | 2609445 - 2610071 | 22924.5 |
| drug resistance transporter, emrb/qaca subfamily | SAMN04244553_2622 | Not Available | Positive | 2610112 - 2611719 | 55169.8 |
| had-superfamily subfamily ib hydrolase, tigr01490 | SAMN04244553_2623 | Not Available | Positive | 2611722 - 2612390 | 24983.8 |
| aaa domain-containing protein | SAMN04244553_2624 | Not Available | Positive | 2612410 - 2613198 | 29053.1 |
| d-mannose binding lectin | SAMN04244553_2625 | Not Available | Negative | 2613318 - 2613902 | 20600.4 |
| hypothetical protein | SAMN04244553_2626 | Not Available | Positive | 2614191 - 2614643 | 15442.3 |
| hypothetical protein | SAMN04244553_2627 | Not Available | Negative | 2614832 - 2615737 | 32282.8 |
| imp cyclohydrolase /phosphoribosylaminoimidazolecarboxamide formyltransferase | SAMN04244553_2628 | Not Available | Negative | 2615906 - 2617477 | 54997.7 |
| formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase | SAMN04244553_2629 | Not Available | Negative | 2617474 - 2618106 | 21961.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

