Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_2610 | Not Available | Positive | 2603078 - 2603299 | 7708.31 |
| large subunit ribosomal protein l32 | SAMN04244553_2611 | Not Available | Negative | 2603376 - 2603549 | 6455.09 |
| large subunit ribosomal protein l31 | SAMN04244553_2612 | Not Available | Negative | 2603551 - 2603817 | 9992.62 |
| gtpase, g3e family | SAMN04244553_2613 | Not Available | Negative | 2603814 - 2605142 | 47049.0 |
| lsu ribosomal protein l28p | SAMN04244553_2614 | Not Available | Positive | 2605243 - 2605479 | 8888.73 |
| lsu ribosomal protein l33p | SAMN04244553_2615 | Not Available | Positive | 2605488 - 2605658 | 6625.02 |
| ssu ribosomal protein s14p | SAMN04244553_2616 | Not Available | Positive | 2605660 - 2605965 | 11459.9 |
| ssu ribosomal protein s18p | SAMN04244553_2617 | Not Available | Positive | 2605998 - 2606252 | 9499.74 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN04244553_2618 | Not Available | Positive | 2606668 - 2607663 | 34588.0 |
| avirulence d protein (avrd) | SAMN04244553_2619 | Not Available | Positive | 2607703 - 2608695 | 36063.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

