Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdenum cofactor synthesis domain-containing protein | SAMN04244553_2600 | Not Available | Negative | 2592226 - 2592795 | 18829.5 |
| putative serine protease pepd | SAMN04244553_2601 | Not Available | Negative | 2592792 - 2594171 | 45557.7 |
| two-component system, ompr family, sensor histidine kinase mprb | SAMN04244553_2602 | Not Available | Negative | 2594244 - 2595710 | 52685.3 |
| two-component system, ompr family, response regulator mpra | SAMN04244553_2603 | Not Available | Negative | 2595722 - 2596408 | 25599.9 |
| signal transduction histidine kinase | SAMN04244553_2604 | Not Available | Positive | 2596763 - 2599399 | 93636.9 |
| hypothetical protein | SAMN04244553_2605 | Not Available | Positive | 2599396 - 2599806 | 14254.2 |
| protein of unknown function | SAMN04244553_2606 | Not Available | Positive | 2599815 - 2600189 | 13418.2 |
| hypothetical protein | SAMN04244553_2607 | Not Available | Positive | 2600170 - 2600799 | 22598.0 |
| mhyt domain-containing protein, no-binding membrane sensor | SAMN04244553_2608 | Not Available | Positive | 2600826 - 2601578 | 26329.4 |
| protein of unknown function | SAMN04244553_2609 | Not Available | Positive | 2601620 - 2602639 | 36236.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

