Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_0359 | Not Available | Positive | 160920 - 161843 | 32367.3 |
| streptomycin 3-kinase | SAMN04244553_0360 | Not Available | Negative | 161850 - 162659 | 29470.6 |
| zinc/manganese transport system atp-binding protein | SAMN04244553_0361 | Not Available | Negative | 162670 - 163359 | 24491.6 |
| abc-type mn2+/zn2+ transport system, permease component | SAMN04244553_0362 | Not Available | Positive | 163419 - 165398 | 67908.3 |
| zinc/manganese transport system substrate-binding protein | SAMN04244553_0363 | Not Available | Positive | 165395 - 166306 | 32434.9 |
| hypothetical protein | SAMN04244553_0364 | Not Available | Positive | 166339 - 167499 | 40499.8 |
| catechol 2,3-dioxygenase | SAMN04244553_0365 | Not Available | Negative | 167576 - 168079 | 17620.5 |
| dna-binding transcriptional regulator, arsr family | SAMN04244553_0366 | Not Available | Positive | 168180 - 168539 | 12429.3 |
| conserved hypothetical protein | SAMN04244553_0367 | Not Available | Negative | 168648 - 169091 | 16671.7 |
| uncharacterized conserved protein ybjt, contains nad(p)-binding and duf2867 domains | SAMN04244553_0368 | Not Available | Negative | 169212 - 170039 | 29861.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

