Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-aminobutyric acid receptor subunit epsilon | SAMN04244553_2569 | Not Available | Negative | 2566716 - 2568008 | 47406.1 |
| hypothetical protein | SAMN04244553_2570 | Not Available | Positive | 2569107 - 2569283 | 6491.72 |
| hypothetical protein | SAMN04244553_2571 | Not Available | Negative | 2569627 - 2570451 | 29805.2 |
| hypothetical protein | SAMN04244553_2572 | Not Available | Negative | 2570484 - 2570744 | 9144.53 |
| hypothetical protein | SAMN04244553_2573 | Not Available | Positive | 2571369 - 2572553 | 38896.0 |
| putative hydrolase of the had superfamily | SAMN04244553_2574 | Not Available | Positive | 2572547 - 2573191 | 23531.7 |
| transposase | SAMN04244553_2575 | Not Available | Positive | 2573457 - 2574569 | 42603.3 |
| wxg100 family type vii secretion target | SAMN04244553_2576 | Not Available | Positive | 2574995 - 2575321 | 11372.2 |
| wxg100 family type vii secretion target | SAMN04244553_2577 | Not Available | Positive | 2575378 - 2575671 | 10614.5 |
| endou nuclease | SAMN04244553_2578 | Not Available | Positive | 2575786 - 2577054 | 44256.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

