Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arginine deiminase | SAMN04244553_2539 | Not Available | Positive | 2534470 - 2535750 | 45961.9 |
| dna-binding transcriptional regulator yhcf, gntr family | SAMN04244553_2540 | Not Available | Positive | 2535758 - 2536117 | 12776.2 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN04244553_2541 | Not Available | Negative | 2536304 - 2537902 | 58706.0 |
| hypothetical protein | SAMN04244553_2542 | Not Available | Positive | 2538316 - 2538933 | 23431.1 |
| hypothetical protein | SAMN04244553_2543 | Not Available | Positive | 2538933 - 2539448 | 18242.9 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN04244553_2544 | Not Available | Positive | 2539826 - 2540656 | 29515.5 |
| alpha-1,6-mannosyltransferase | SAMN04244553_2545 | Not Available | Negative | 2541141 - 2542259 | 39751.1 |
| diguanylate cyclase/phosphodiesterase with gaf sensor | SAMN04244553_2546 | Not Available | Negative | 2542360 - 2544228 | 67704.7 |
| molybdopterin or thiamine biosynthesis adenylyltransferase | SAMN04244553_2547 | Not Available | Negative | 2544245 - 2546386 | 76909.7 |
| hypothetical protein | SAMN04244553_2548 | Not Available | Negative | 2546383 - 2547153 | 27973.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

