Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, tetr family | SAMN04244553_2529 | Not Available | Positive | 2525323 - 2525919 | 21289.1 |
| copper chaperone | SAMN04244553_2530 | Not Available | Positive | 2526012 - 2526218 | 6818.04 |
| hypothetical protein | SAMN04244553_2531 | Not Available | Positive | 2526218 - 2527090 | 30770.9 |
| dimethyladenosine transferase | SAMN04244553_2532 | Not Available | Negative | 2527238 - 2528122 | 31072.5 |
| uncharacterized conserved protein yabe, contains g5 and tandem duf348 domains | SAMN04244553_2533 | Not Available | Negative | 2528271 - 2529398 | 40201.0 |
| tatd dnase family protein | SAMN04244553_2534 | Not Available | Negative | 2529576 - 2530409 | 30157.6 |
| methionyl-trna synthetase | SAMN04244553_2535 | Not Available | Positive | 2530466 - 2532064 | 59862.5 |
| 2-methylisocitrate lyase, pep mutase family | SAMN04244553_2536 | Not Available | Negative | 2532126 - 2532878 | 26777.7 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | SAMN04244553_2537 | Not Available | Positive | 2532991 - 2533875 | 31865.2 |
| merr family transcriptional regulator, redox-sensitive transcriptional activator soxr | SAMN04244553_2538 | Not Available | Negative | 2533844 - 2534329 | 18204.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

