Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial peptide chain release factor 3 (brf-3) | SAMN04244553_2519 | Not Available | Positive | 2514026 - 2515669 | 59321.7 |
| conserved hypothetical protein | SAMN04244553_2520 | Not Available | Negative | 2515687 - 2516166 | 17423.3 |
| rna polymerase, sigma subunit, ecf family | SAMN04244553_2521 | Not Available | Negative | 2516274 - 2517239 | 35547.6 |
| snoal-like domain-containing protein | SAMN04244553_2522 | Not Available | Negative | 2517236 - 2517946 | 26579.7 |
| protein of unknown function | SAMN04244553_2523 | Not Available | Negative | 2518040 - 2518915 | 31623.4 |
| hypothetical protein | SAMN04244553_2524 | Not Available | Positive | 2519283 - 2520605 | 49387.7 |
| protein of unknown function | SAMN04244553_2525 | Not Available | Positive | 2520596 - 2521516 | 32616.7 |
| atp-binding cassette, subfamily f, uup | SAMN04244553_2526 | Not Available | Negative | 2521606 - 2523396 | 64860.4 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMN04244553_2527 | Not Available | Negative | 2523481 - 2524470 | 33554.2 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN04244553_2528 | Not Available | Negative | 2524493 - 2525245 | 25846.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

