Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | SAMN04244553_2489 | Not Available | Positive | 2479517 - 2481751 | 78444.9 |
| cystathionine beta-synthase | SAMN04244553_2490 | Not Available | Positive | 2481854 - 2482885 | 36257.0 |
| multidrug resistance protein, mate family | SAMN04244553_2491 | Not Available | Positive | 2482882 - 2484285 | 49198.2 |
| tellurium resistance protein terd | SAMN04244553_2492 | Not Available | Negative | 2484306 - 2484881 | 20371.6 |
| hypothetical protein | SAMN04244553_2493 | Not Available | Negative | 2484931 - 2485413 | 17402.6 |
| mioc protein | SAMN04244553_2494 | Not Available | Negative | 2485619 - 2486074 | 16292.8 |
| stealth protein cr1, conserved region 1 | SAMN04244553_2495 | Not Available | Positive | 2486590 - 2488074 | 54880.6 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN04244553_2496 | Not Available | Negative | 2488022 - 2489011 | 35370.0 |
| protein of unknown function | SAMN04244553_2497 | Not Available | Positive | 2489179 - 2489790 | 20713.6 |
| glycerol dehydrogenase | SAMN04244553_2498 | Not Available | Negative | 2489882 - 2490973 | 37217.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

