Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN04244553_2479 | Not Available | Negative | 2467045 - 2467992 | 33346.7 |
| hypothetical protein | SAMN04244553_2480 | Not Available | Negative | 2467985 - 2468512 | 18780.2 |
| septum formation initiator | SAMN04244553_2481 | Not Available | Negative | 2468509 - 2469153 | 23517.1 |
| enolase | SAMN04244553_2482 | Not Available | Negative | 2469244 - 2470530 | 44922.1 |
| transglycosylase slt domain-containing protein | SAMN04244553_2483 | Not Available | Negative | 2470654 - 2471379 | 25124.8 |
| atpase components of various abc-type transport systems, contain duplicated atpase | SAMN04244553_2484 | Not Available | Negative | 2471487 - 2474612 | 106100.0 |
| peptide/nickel transport system permease protein | SAMN04244553_2485 | Not Available | Negative | 2474626 - 2475555 | 32326.3 |
| peptide/nickel transport system substrate-binding protein | SAMN04244553_2486 | Not Available | Negative | 2475552 - 2477081 | 54675.5 |
| taurine catabolism dioxygenase taud, tfda family | SAMN04244553_2487 | Not Available | Positive | 2477390 - 2478544 | 42046.3 |
| ornithine cyclodeaminase | SAMN04244553_2488 | Not Available | Positive | 2478516 - 2479526 | 35803.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

