Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deazaflavin-dependent oxidoreductase, nitroreductase family | SAMN04244553_2429 | Not Available | Positive | 2412630 - 2413079 | 16474.8 |
| hypothetical protein | SAMN04244553_2430 | Not Available | Negative | 2413691 - 2414887 | 44894.8 |
| pantothenate kinase | SAMN04244553_2431 | Not Available | Positive | 2415069 - 2416001 | 35276.4 |
| hypothetical protein | SAMN04244553_2432 | Not Available | Positive | 2416172 - 2416438 | 9985.18 |
| hypothetical protein | SAMN04244553_2433 | Not Available | Negative | 2416449 - 2417051 | 22271.2 |
| undecaprenyl pyrophosphate synthetase | SAMN04244553_2434 | Not Available | Negative | 2417090 - 2417908 | 30973.7 |
| hemolysin iii | SAMN04244553_2435 | Not Available | Positive | 2417994 - 2418701 | 24956.0 |
| adenylate cyclase | SAMN04244553_2436 | Not Available | Positive | 2419059 - 2420735 | 58919.3 |
| hypothetical protein | SAMN04244553_2437 | Not Available | Negative | 2421036 - 2422466 | 49418.1 |
| dna-binding transcriptional regulator, iclr family | SAMN04244553_2438 | Not Available | Negative | 2422640 - 2423545 | 31177.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

