Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN04244553_2408 | Not Available | Negative | 2393326 - 2393892 | 20025.8 |
| fructose-1,6-bisphosphatase ii | SAMN04244553_2409 | Not Available | Positive | 2394024 - 2395067 | 36359.3 |
| phosphotransferase enzyme family protein | SAMN04244553_2410 | Not Available | Positive | 2395143 - 2396123 | 34420.9 |
| hypothetical protein | SAMN04244553_2411 | Not Available | Positive | 2396163 - 2396417 | 9241.98 |
| fumarase, class ii | SAMN04244553_2412 | Not Available | Positive | 2396517 - 2397920 | 49671.5 |
| acyl-[acyl-carrier-protein] desaturase | SAMN04244553_2413 | Not Available | Negative | 2397989 - 2398858 | 32436.2 |
| lgfp repeat-containing protein | SAMN04244553_2415 | Not Available | Negative | 2398966 - 2399562 | 20623.4 |
| phoh-like atpase | SAMN04244553_2416 | Not Available | Negative | 2399766 - 2401178 | 50853.7 |
| hypothetical protein | SAMN04244553_2417 | Not Available | Positive | 2401560 - 2401832 | 9978.82 |
| limonene-1,2-epoxide hydrolase | SAMN04244553_2418 | Not Available | Negative | 2402158 - 2402580 | 15986.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

