Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_2397 | Not Available | Positive | 2380993 - 2381421 | 15547.7 |
| exonuclease sbcc | SAMN04244553_2398 | Not Available | Negative | 2381423 - 2384563 | 112458.0 |
| exodeoxyribonuclease i subunit d | SAMN04244553_2399 | Not Available | Negative | 2385117 - 2386304 | 42196.8 |
| dna recombination protein rmuc | SAMN04244553_2400 | Not Available | Positive | 2386498 - 2387661 | 42037.3 |
| hypothetical protein | SAMN04244553_2401 | Not Available | Positive | 2387834 - 2388643 | 29078.3 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMN04244553_2402 | Not Available | Negative | 2389025 - 2390035 | 36247.9 |
| hypothetical protein | SAMN04244553_2403 | Not Available | Positive | 2390172 - 2390816 | 23449.4 |
| exodeoxyribonuclease vii large subunit | SAMN04244553_2404 | Not Available | Positive | 2390890 - 2392224 | 47752.3 |
| exodeoxyribonuclease vii small subunit | SAMN04244553_2405 | Not Available | Positive | 2392227 - 2392463 | 8593.93 |
| protein n-acetyltransferase, rimj/riml family | SAMN04244553_2407 | Not Available | Negative | 2392648 - 2393151 | 17944.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

