Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_0339 | Not Available | Negative | 141259 - 142182 | 32487.0 |
| serine/threonine protein kinase | SAMN04244553_0340 | Not Available | Negative | 142474 - 144291 | 62749.5 |
| gluconokinase | SAMN04244553_0341 | Not Available | Positive | 144429 - 144944 | 18498.2 |
| peptidase m50b-like | SAMN04244553_0342 | Not Available | Negative | 144941 - 145735 | 27791.3 |
| predicted dehydrogenase | SAMN04244553_0343 | Not Available | Negative | 145794 - 146843 | 37585.4 |
| uncharacterized membrane protein ycze | SAMN04244553_0344 | Not Available | Positive | 147015 - 147674 | 23271.0 |
| transcriptional regulator glxa family, contains an amidase domain and an arac-type dna-binding hth domain | SAMN04244553_0345 | Not Available | Positive | 147756 - 148682 | 32507.0 |
| hd domain-containing protein | SAMN04244553_0346 | Not Available | Positive | 148746 - 149480 | 26168.8 |
| nadph-dependent ferric siderophore reductase, contains fad-binding and sip domains | SAMN04244553_0347 | Not Available | Negative | 149579 - 150331 | 27572.5 |
| nitroreductase | SAMN04244553_0348 | Not Available | Positive | 150467 - 151294 | 30325.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

