Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein phnb, glyoxalase superfamily | SAMN04244553_2387 | Not Available | Positive | 2369519 - 2369938 | 15451.9 |
| multiple sugar transport system permease protein | SAMN04244553_2388 | Not Available | Negative | 2370125 - 2371021 | 32882.9 |
| multiple sugar transport system permease protein | SAMN04244553_2389 | Not Available | Negative | 2371423 - 2372388 | 35256.5 |
| multiple sugar transport system substrate-binding protein | SAMN04244553_2390 | Not Available | Negative | 2372447 - 2373796 | 48677.0 |
| carbon starvation protein | SAMN04244553_2391 | Not Available | Positive | 2374011 - 2376290 | 80506.4 |
| uncharacterized short protein ybdd, duf466 family | SAMN04244553_2392 | Not Available | Positive | 2376290 - 2376532 | 9375.03 |
| dna-3-methyladenine glycosylase ii | SAMN04244553_2393 | Not Available | Positive | 2376731 - 2378347 | 58004.4 |
| methylated-dna-[protein]-cysteine s-methyltransferase | SAMN04244553_2394 | Not Available | Positive | 2378382 - 2378894 | 18286.8 |
| drug resistance transporter, emrb/qaca subfamily | SAMN04244553_2395 | Not Available | Positive | 2379045 - 2380556 | 50629.2 |
| prevent-host-death family protein | SAMN04244553_2396 | Not Available | Positive | 2380655 - 2380996 | 12422.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

