Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_2367 | Not Available | Negative | 2352763 - 2352969 | 6995.22 |
| hypothetical protein | SAMN04244553_2368 | Not Available | Negative | 2353078 - 2353482 | 13396.1 |
| toxin yoeb | SAMN04244553_2369 | Not Available | Negative | 2353716 - 2353985 | 10171.2 |
| antitoxin yefm | SAMN04244553_2370 | Not Available | Negative | 2353978 - 2354235 | 9273.88 |
| merr hth family regulatory protein | SAMN04244553_2371 | Not Available | Negative | 2355163 - 2356131 | 35304.0 |
| acyl carrier protein | SAMN04244553_2372 | Not Available | Positive | 2356267 - 2356572 | 11021.0 |
| uncharacterized conserved protein yndb, ahsa1/start domain | SAMN04244553_2373 | Not Available | Positive | 2356620 - 2357054 | 16861.3 |
| hypothetical protein | SAMN04244553_2374 | Not Available | Positive | 2357231 - 2357461 | 8703.1 |
| hypothetical protein | SAMN04244553_2375 | Not Available | Negative | 2357517 - 2358125 | 22995.0 |
| hypothetical protein | SAMN04244553_2376 | Not Available | Positive | 2358378 - 2359109 | 25860.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

