Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_2357 | Not Available | Negative | 2345876 - 2346247 | 13421.5 |
| hypothetical protein | SAMN04244553_2358 | Not Available | Negative | 2346249 - 2346734 | 17023.6 |
| hypothetical protein | SAMN04244553_2359 | Not Available | Negative | 2346731 - 2347720 | 35049.7 |
| hypothetical protein | SAMN04244553_2360 | Not Available | Negative | 2347710 - 2348102 | 13681.3 |
| protein of unknown function, duf488 | SAMN04244553_2361 | Not Available | Negative | 2348816 - 2349301 | 18031.6 |
| enamine deaminase rida, house cleaning of reactive enamine intermediates, yjgf/yer057c/uk114 family | SAMN04244553_2362 | Not Available | Negative | 2349371 - 2349838 | 16337.7 |
| predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domains | SAMN04244553_2363 | Not Available | Positive | 2349901 - 2350875 | 35234.1 |
| hypothetical protein | SAMN04244553_2364 | Not Available | Positive | 2351112 - 2351426 | 10727.7 |
| hypothetical protein | SAMN04244553_2365 | Not Available | Positive | 2351754 - 2351936 | 6648.94 |
| dihydrofolate reductase | SAMN04244553_2366 | Not Available | Negative | 2352051 - 2352626 | 21303.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

