Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04244553_2337 | Not Available | Positive | 2329150 - 2329458 | 11131.2 |
| 4a-hydroxytetrahydrobiopterin dehydratase | SAMN04244553_2338 | Not Available | Positive | 2329508 - 2329804 | 10451.3 |
| alpha-1,2-mannosyltransferase | SAMN04244553_2339 | Not Available | Negative | 2329845 - 2331047 | 44100.4 |
| hypothetical protein | SAMN04244553_2340 | Not Available | Positive | 2331429 - 2332211 | 25908.3 |
| hypothetical protein | SAMN04244553_2341 | Not Available | Positive | 2332329 - 2332685 | 12460.8 |
| protein of unknown function | SAMN04244553_2342 | Not Available | Negative | 2332696 - 2333409 | 25241.0 |
| hypothetical protein | SAMN04244553_2343 | Not Available | Negative | 2333574 - 2334710 | 41442.2 |
| chap domain-containing protein | SAMN04244553_2344 | Not Available | Negative | 2334938 - 2335537 | 21654.5 |
| major facilitator superfamily protein | SAMN04244553_2345 | Not Available | Negative | 2335616 - 2337040 | 48483.7 |
| dna-binding transcriptional regulator, marr family | SAMN04244553_2346 | Not Available | Positive | 2337116 - 2337598 | 17819.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

