Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Nocardiaceae
Genus
Nocardia
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Mycobacteriales |
| Family | Nocardiaceae |
| Genus | Nocardia |
| Species | Nocardia amikacinitolerans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1155594 bp
Thymine Count
1154748 bp
Guanine Count
2538273 bp
Cytosine Count
2528954 bp
Genome Length
7379133 bp
Protein-coding Genes
6416 genes
Non-Coding Genes
108 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyldiaminopimelate aminotransferase apoenzyme | SAMN04244553_2327 | Not Available | Negative | 2317106 - 2318215 | 39329.0 |
| nad-dependent dihydropyrimidine dehydrogenase, prea subunit | SAMN04244553_2328 | Not Available | Negative | 2318224 - 2318544 | 11687.7 |
| fo synthase subunit 1 /fo synthase subunit 2 | SAMN04244553_2329 | Not Available | Negative | 2318758 - 2321352 | 93847.5 |
| hypothetical protein | SAMN04244553_2330 | Not Available | Positive | 2321516 - 2322022 | 18445.2 |
| putative membrane protein | SAMN04244553_2331 | Not Available | Positive | 2322019 - 2323542 | 54780.0 |
| hypothetical protein | SAMN04244553_2332 | Not Available | Negative | 2323877 - 2324359 | 16975.2 |
| uba-like domain-containing protein | SAMN04244553_2333 | Not Available | Negative | 2324356 - 2324553 | 7426.94 |
| n-acetyl-1-d-myo-inositol-2-amino-2-deoxy-alpha- d-glucopyranoside deacetylase | SAMN04244553_2334 | Not Available | Negative | 2324560 - 2325450 | 31637.5 |
| abc-type transport system, substrate-binding protein | SAMN04244553_2335 | Not Available | Negative | 2325447 - 2327192 | 60157.6 |
| gtp-binding protein | SAMN04244553_2336 | Not Available | Negative | 2327230 - 2329128 | 68338.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Keratitis | Causes | PMC13340100 |
| Nocardia amikacinitolerans keratitis | Causes | PMC8898206 |

